Publications

Research outputs

Peer-reviewed papers, preprints and methods from the lab.

2026

Sensory Nerve‐Derived CGRP Controls Osteoclastogenesis by Limiting Macrophage Bioenergetics in Bone Repair

Liu J, Zhang T, Mu Y, Li L, Jin J, Dudley KJ, Gao W, Cai D, Yan F, Xiao L, Xiao Y
Advanced Science
2025

Three-Dimensional Dynamic Cell Models for Metabolic Dysfunction-Associated Steatotic Liver Disease Progression

Huang Z, Li L, Dudley K, Xiao L, Huang G, Subramaniam VN, Chen C, Crawford R, Xiao Y
BME Frontiers
2024

VPBrowse: Genome‐based representation of MS/MS spectra to quantify 10,000 bovine proteins

Paramasivan S, Ashick M, Dudley KJ, Satake N, Mills PC, Sadowski P, Nagaraj SH
PROTEOMICS
2024

Non‐CG DNA methylation marks the transition from pupa to adult in Helicoverpa armigera

Royle JW, Hurwood D, Sadowski P, Dudley KJ
Insect Molecular Biology
2024

Author Correction: A multi-omic Nicotiana benthamiana resource for fundamental research and biotechnology

Ranawaka B, An J, Lorenc MT, Jung H, Sulli M, Aprea G, Roden S, Llaca V, Hayashi S, Asadyar L, LeBlanc Z, Ahmed Z, Naim F, de Campos SB, Cooper T, de Felippes FF, Dong P, Zhong S, Garcia-Carpintero V, Orzaez D, Dudley KJ, Bombarely A, Bally J, Winefield C, Giuliano G, Waterhouse PM
Nature Plants
2023

A hot topic: thermophilic plastic biodegradation

James-Pearson LF, Dudley KJ, Te'o VSJ, Patel BK
Trends in Biotechnology
2023

Genomic, functional and structural analyses elucidate evolutionary innovation within the sea anemone 8 toxin family

Ashwood LM, Elnahriry KA, Stewart ZK, Shafee T, Naseem MU, Szanto TG, van der Burg CA, Smith HL, Surm JM, Undheim EAB, Madio B, Hamilton BR, Guo S, Wai DCC, Coyne VL, Phillips MJ, Dudley KJ, Hurwood DA, Panyi G, King GF, Pavasovic A, Norton RS, Prentis PJ
BMC Biology
2023

A multi-omic Nicotiana benthamiana resource for fundamental research and biotechnology

Ranawaka B, An J, Lorenc MT, Jung H, Sulli M, Aprea G, Roden S, Llaca V, Hayashi S, Asadyar L, LeBlanc Z, Ahmed Z, Naim F, de Campos SB, Cooper T, de Felippes FF, Dong P, Zhong S, Garcia-Carpintero V, Orzaez D, Dudley KJ, Bombarely A, Bally J, Winefield C, Giuliano G, Waterhouse PM
Nature Plants
2023

Expression of the GCG gene and secretion of active glucagon‐like peptide‐1 varies along the length of intestinal tract in horses

Fitzgerald DM, Cash CM, Dudley KJ, Sibthorpe PEM, Sillence MN, de Laat MA
Equine Veterinary Journal
2022

Genomic, Functional and Structural Analyses Reveal Mechanisms of Evolutionary Innovation within the Sea Anemone 8 Toxin Family

Ashwood LM, Elnahriry KA, Stewart ZK, Shafee T, Naseem MU, Szanto TG, van der Burg CA, Smith HL, Surm JM, Undheim EA, Madio B, Hamilton BR, Guo S, Wai DC, Coyne VL, Phillips MJ, Dudley KJ, Hurwood DA, Panyi G, King GF, Pavasovic A, Norton RS, Prentis PJ
2019

The Rapid Methylation of T-DNAs Upon Agrobacterium Inoculation in Plant Leaves

Philips JG, Dudley KJ, Waterhouse PM, Hellens RP
Frontiers in Plant Science
2019

Large expert-curated database for benchmarking document similarity detection in biomedical literature search

Brown P, Tan AC, El-Esawi MA, Liehr T, Blanck O, Gladue DP, Almeida GMF, Cernava T, Sorzano CO, Yeung AWK, Engel MS, Chandrasekaran AR, Muth T, Staege MS, Daulatabad SV, Widera D, Zhang J, Meule A, Honjo K, Pourret O, Yin CC, Zhang Z, Cascella M, Flegel WA, Goodyear CS, van Raaij MJ, Bukowy-Bieryllo Z, Campana LG, Kurniawan NA, Lalaouna D, Hüttner FJ, Ammerman BA, Ehret F, Cobine PA, Tan EC, Han…
Database
2018

Equine glucagon-like peptide-1 receptor physiology

Kheder MH, Bailey SR, Dudley KJ, Sillence MN, de Laat MA
PeerJ
2017
2017

Sex and tissue specific gene expression patterns identified following de novo transcriptomic analysis of the Norway lobster, Nephrops norvegicus

Rotllant G, Nguyen TV, Sbragaglia V, Rahi L, Dudley KJ, Hurwood D, Ventura T, Company JB, Chand V, Aguzzi J, Mather PB
BMC Genomics
2017

Gene Expression of the GIP and GLP-1 Receptors in the Horse

FASEB JOURNAL
2016

Navigating the research data life cycle

Griffin P, Appels R, Bulach D, Dudley K, Keeble-Gagnere G, Pask A, Pope B, Roessner U, Seemann T, Bolser D, Khadake J, Lewis S, Orchard S, Tyagi S, Lonie A, Schneider MV
2016

Detection of Recently Discovered Human Polyomaviruses in a Longitudinal Kidney Transplant Cohort

Bialasiewicz S, Rockett R, Barraclough K, Leary D, Dudley K, Isbel N, Sloots T
American Journal of Transplantation
2015

Specific rolling circle amplification of low-copy human polyomaviruses BKV, HPyV6, HPyV7, TSPyV, and STLPyV

Rockett R, Barraclough KA, Isbel NM, Dudley KJ, Nissen MD, Sloots TP, Bialasiewicz S
Journal of Virological Methods
2011

The brain-specific microRNA miR-128b regulates the formation of fear-extinction memory

Lin Q, Wei W, Coelho CM, Li X, Baker-Andresen D, Dudley K, Ratnu VS, Boskovic Z, Kobor MS, Sun YE, Bredy TW
Nature Neuroscience
2011

Paradoxical Enhancement of Fear Extinction Memory and Synaptic Plasticity by Inhibition of the Histone Acetyltransferase p300

Marek R, Coelho CM, Sullivan RKP, Baker-Andresen D, Li X, Ratnu V, Dudley KJ, Meyers D, Mukherjee C, Cole PA, Sah P, Bredy TW
The Journal of Neuroscience
2011

Epigenetic mechanisms mediating vulnerability and resilience to psychiatric disorders

Dudley KJ, Li X, Kobor MS, Kippin TE, Bredy TW
Neuroscience & Biobehavioral Reviews
2009

Pituitary tumours: all silent on the epigenetics front

Dudley KJ, Revill K, Clayton RN, Farrell WE
Journal of Molecular Endocrinology
2009

Loss of neuronatin expression is associated with promoter hypermethylation in pituitary adenoma

Revill K, Dudley KJ, Clayton RN, McNicol AM, Farrell WE
Endocrine-Related Cancer
2008

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